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A list containing QTL LOD scores, thresholds, and vline (annotation) data for demonstrating the functions in geneticMapR. It also include a colors character vector and labels for publication ready plots.

Usage

qtl_example

Format

A list with the elements:

qtl_df

A scanone and data.frame class object containing LOD scores for each loci in the map for 7 trauts

thresholds

A scanone and dara.frame class object containing significant thresholds for each variable

vline

A data frame with information for plot annotation

colors

A vector with custom colors for plot customization

labes

A vector with publication ready labels for plot customization

Source

Own author's QTL analysis using R/qtl on a Table beet shape mapping population (F2).